A sequence assembly suite with SNP detection for "hard" projects.
An open, extensible web-based collaborative platform for microarray gene expression, sequence and PPI data analysis, exposing distinct chainable components for clustering, pattern discovery, statistics, machine-learning algorithms and visualization.
Free software for constructing global alignments of multiple rearranged genomes. The visualization environment displays sequence similarity profiles and annotated sequence features.
Software for simulating metabolic, signal and genetic networks. Home of Jarnac, JDesigner and SCAMP.
Windows software that computes and charts codon and amino acid frequencies in whole genomes. Produces fully customizable scatter plots with the possibility to export graphics or text files for further analysis. Free for academic users.
GoCore is an free Excel based tool for protein sequence alignment, comparisons and functional predictions in a simple, visually appealing, manner.
Knoppix based bioinformatics software tools. Bootable from CD.
Commercial Mac OS X sequence analysis and structure visualization software.
Open source Java software for checking and conversion of MicroArray Array Design data file (ADF -Array Design File- MAGE-ML).
Free Windows biological sequence alignment editor.
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